CD70 — Single Gene Characterization
This report provides a multi-faceted characterization of CD70 across the CoMMpass cohort: expression distribution, survival stratification, cytogenetic context, and co-expression correlations.
Generated with gene_report("CD70"). See ?gene_report for usage.
Expression Distribution
VST-normalized expression values across all samples, showing the distribution shape and central tendency.
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Survival by Expression
Patients split at median CD70 expression into High/Low groups.
Expression by Cytogenetic Subtype
Boxplots comparing expression levels across FISH-defined cytogenetic marker groups (t(4;14), t(14;16), del(17p)).
Data not available: Target
vig_gene_expr_subtype returned NULL. See
Data Sources.
Gene-Gene Correlations
Top correlated genes with CD70 (Pearson, VST expression).
Data Sources
Results in this vignette are derived from the MMRF CoMMpass study (MMRF-COMMPASS, ~1,143 patients), downloaded via TCGAbiolinks. The pipeline runs with a configurable sample_limit (default 200; CI uses 20).
For full citations, data access tiers, and the distinction between pipeline data and synthetic test data, see the Data Sources vignette.
Recent Changes
Recent project commits with lines added, files changed, and change categories.
Reproducibility
Session Info (click to expand)
Show code
sessionInfo()
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